Package: ActiSleep
Type: Package
Title: Sleep Duration Estimation from Accelerometer Data
Version: 1.0.0
Date: 2026-04-16
Authors@R: c(
    person("Jonggyu", "Baek", email = "Jonggyu.Baek@umassmed.edu", role = "aut"),
    person("Margaret", "Banker", email = "margaret.banker@northwestern.edu", role = "aut"),
    person("Nathan", "Szeto", email = "nszeto@umich.edu", role = c("aut", "cre")),
    person("Alice", "Cleynen", role = "aut"),
    person("Guillem", "Rigaill", role = "aut"),
    person("Michel", "Koskas", role = "aut"))
Description: Estimates daily sleep duration from wrist or hip
        accelerometer data using a Pruned Dynamic Programming (PDP)
        changepoint algorithm. PDP partitions a minute-level activity
        series into segments, then identifies transitions between sleep
        and wakefulness by detecting extended periods of low physical
        activity.  Five cost-function models (Poisson, Normal, Negative
        binomial, Variance, Exponential) accommodate different
        activity-count distributions.  Optional non-wear detection and
        sleep diary integration are supported.  Reference: Baek,
        Jonggyu, Banker, Margaret, Jansen, Erica C., She, Xichen,
        Peterson, Karen E., Pitchford, E. Andrew, Song, Peter X. K.
        (2021) An Efficient Segmentation Algorithm to Estimate Sleep
        Duration from Actigraphy Data <doi:10.1007/s12561-021-09309-3>.
License: GPL-3
URL: https://github.com/n-szeto/ActiSleep
BugReports: https://github.com/n-szeto/ActiSleep/issues
Imports: lubridate, accelerometry, DBI, RSQLite, methods, utils, stats,
        Rcpp
LinkingTo: Rcpp
Depends: R (>= 3.5)
Suggests: testthat (>= 3.0.0), knitr, rmarkdown
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: yes
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev make libharfbuzz-dev libicu-dev libpng-dev
        libuv1-dev libxml2-dev
Repository: https://n-szeto.r-universe.dev
Date/Publication: 2026-04-16 17:54:21 UTC
RemoteUrl: https://github.com/n-szeto/actisleep
RemoteRef: HEAD
RemoteSha: 4ab48c6ed019254e083971360246d5da008be627
Packaged: 2026-06-16 08:40:37 UTC; root
Author: Jonggyu Baek [aut],
  Margaret Banker [aut],
  Nathan Szeto [aut, cre],
  Alice Cleynen [aut],
  Guillem Rigaill [aut],
  Michel Koskas [aut]
Maintainer: Nathan Szeto <nszeto@umich.edu>